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  1. BBTools BBTools Public

    Python 5 4

  2. kb_uploadmethods kb_uploadmethods Public

    Python 4 22

  3. kb_gtdbtk kb_gtdbtk Public

    GTDB-Tk App

    Python 4 10

  4. kb_djornl kb_djornl Public

    A KBase module wrapper and visualization for RWR tools which use the random walk with restart method on multiplex coexpression networks representing genes (nodes) and distinct lines of evidence (ed…

    Python 4 5

  5. PangenomeOrthomcl PangenomeOrthomcl Public

    Python 3 7

  6. jgi_mg_assembly jgi_mg_assembly Public

    Contains apps for running the JGI metagenome assembly pipeline

    Python 3 4

Repositories

Showing 10 of 234 repositories
  • KBDatalakeApps Public

    Apps designed for generating insights into user data in KBase using KBase Datalake

    kbaseapps/KBDatalakeApps’s past year of commit activity
    Python 0 MIT 3 0 0 Updated Feb 6, 2026
  • RAST_SDK Public
    kbaseapps/RAST_SDK’s past year of commit activity
    Perl 1 MIT 18 1 3 Updated Feb 5, 2026
  • sketch_service Public

    Service that returns similar genomes from a given assembly/genome ID

    kbaseapps/sketch_service’s past year of commit activity
    Python 0 MIT 3 0 18 Updated Feb 1, 2026
  • kb_djornl Public

    A KBase module wrapper and visualization for RWR tools which use the random walk with restart method on multiplex coexpression networks representing genes (nodes) and distinct lines of evidence (edges) facilitating the rapid determination of the functional context of a set of genes of interest.

    kbaseapps/kb_djornl’s past year of commit activity
    Python 4 MIT 5 0 0 Updated Jan 7, 2026
  • kb_nanoplot Public
    kbaseapps/kb_nanoplot’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Dec 16, 2025
  • kb_kaiju Public
    kbaseapps/kb_kaiju’s past year of commit activity
    Python 0 MIT 8 0 2 Updated Dec 8, 2025
  • kb_gtdbtk Public

    GTDB-Tk App

    kbaseapps/kb_gtdbtk’s past year of commit activity
    Python 4 MIT 10 7 3 Updated Dec 2, 2025
  • KBAnnotationApps Public
    kbaseapps/KBAnnotationApps’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Nov 5, 2025
  • kb_bedtools Public Forked from Peanut16/kb_bedtools
    kbaseapps/kb_bedtools’s past year of commit activity
    Python 0 MIT 1 0 1 Updated Oct 21, 2025
  • kb_phylogenomics Public
    kbaseapps/kb_phylogenomics’s past year of commit activity
    Python 2 MIT 6 2 0 Updated Oct 21, 2025
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