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@biodatlab

Biomedical and Data Lab at Mahidol University

BioDat Lab, Mahidol University, Thailand
README.md

Biomedical and Data Lab @ Mahidol University 👋

  • 💫 Biomedical and Data (BioDat) lab at the Department of Biomedical Engineering, Mahidol University runs by Titipat Achakulvisut, titipata since February 2022.
  • 🍙 Our lab works in an intersection of applied natural language processing, applied machine learning, and science of science (or so called metascience).
  • 🧠 We aim to build tools to make better science and build ML applications for biomedical science.
  • 🌟 (Left) Applied machine learning for biomedical science (Right) Applied machine learning for science of science

       

  • 🤖 This organization repo hosts course materials, lab website, and research happening at the lab.

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  1. icip-challenge-2022 icip-challenge-2022 Public

    Multitask learning via pseudo-label generation and ensemble prediction for parasitic egg cell detection: IEEE ICIP Challenge 2022 (3rd place solution)

    Python 6 1

  2. thonburian-whisper thonburian-whisper Public

    Thonburian Whisper: Open models for fine-tuned Whisper in Thai. Try our demo on Huggingface space:

    Jupyter Notebook 182 20

  3. deep-learning-skooldio deep-learning-skooldio Public

    Deep learning notebooks for Skooldio

    Jupyter Notebook 22 8

  4. multitask-vision-ecg multitask-vision-ecg Public

    MS and LVEF classification for ECG image using multi-task deep learning. Demo website (not included model inference, in Thai) ↓

    Jupyter Notebook 5 4

  5. ec-raft ec-raft Public

    [ACL 2025 findings] EC-RAFT: Automated Generation of Clinical Trial Eligibility Criteria through Retrieval-Augmented Fine-Tuning

    Python 4 1

  6. autoimplantpipe autoimplantpipe Public

    A repository for end-to-end autoimplant pipeline: automatic skull segmentation and autoimplant

    Python 4 1

Repositories

Showing 10 of 31 repositories
  • biodatlab.github.io Public

    Website for Biomedical and Data (Bio-Dat) lab at Mahidol University, Thailand

    biodatlab/biodatlab.github.io’s past year of commit activity
    JavaScript 20 MIT 17 0 0 Updated Feb 7, 2026
  • murex-map Public

    Research landscape at Mahidol University, Thailand

    biodatlab/murex-map’s past year of commit activity
    HTML 1 Apache-2.0 0 0 0 Updated Feb 6, 2026
  • hands-on-labs Public

    Hands-on Machine Learning Lab for BME students

    biodatlab/hands-on-labs’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Jan 28, 2026
  • thonburian-tts Public

    ThonburianTTS, a finetuned Thai TTS based on the E2-TTS and F5-TTS architectures, designed to improve pronunciation accuracy, alignment robustness, and zero-shot speaker adaptation for the Thai language

    biodatlab/thonburian-tts’s past year of commit activity
    Jupyter Notebook 22 4 0 0 Updated Jan 13, 2026
  • scicap-titipapa Public

    Leveraging Author-Specific Context for Scientific Figure Caption Generation: 3rd SciCap Challenge

    biodatlab/scicap-titipapa’s past year of commit activity
    Python 5 Apache-2.0 1 0 0 Updated Oct 10, 2025
  • muocr Public

    Evaluation script for Optical Character Recognition

    biodatlab/muocr’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Oct 1, 2025
  • ec-raft Public

    [ACL 2025 findings] EC-RAFT: Automated Generation of Clinical Trial Eligibility Criteria through Retrieval-Augmented Fine-Tuning

    biodatlab/ec-raft’s past year of commit activity
    Python 4 Apache-2.0 1 0 0 Updated Sep 1, 2025
  • autoaudiogram Public

    Object detection-based audiogram classification

    biodatlab/autoaudiogram’s past year of commit activity
    Jupyter Notebook 6 MIT 0 0 0 Updated Aug 18, 2025
  • archehr-qa-lamar Public

    LAMAR at ArchEHR-QA, BioNLP workshop ACL 2025 (1st-place human evaluation score)

    biodatlab/archehr-qa-lamar’s past year of commit activity
    Python 3 0 0 0 Updated Jul 31, 2025
  • thonburian-whisper Public

    Thonburian Whisper: Open models for fine-tuned Whisper in Thai. Try our demo on Huggingface space:

    biodatlab/thonburian-whisper’s past year of commit activity
    Jupyter Notebook 182 MIT 20 2 1 Updated Jul 29, 2025
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People

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